Index A | B | C | D | E | F | G | H | I | L | M | N | O | P | R | S | T | U | W A activity_types() (in module nngt.simulation) ActivityRecord (class in nngt.simulation) add_area() (nngt.geometry.Shape method) add_hole() (nngt.geometry.Shape method) add_meta_group() (nngt.Structure method) add_nodes() (nngt.Group method) add_to_group() (nngt.NeuralPop method) (nngt.Structure method) adjacency_matrix() (in module nngt.analysis) (nngt.Graph method) all_shortest_paths() (in module nngt.analysis) all_to_all() (in module nngt.generation) analyze_raster() (in module nngt.simulation) Animation2d (class in nngt.plot) AnimationNetwork (class in nngt.plot) Area (class in nngt.geometry) area (nngt.geometry.Shape attribute) areas (nngt.geometry.Area property) (nngt.geometry.Shape property) assortativity() (in module nngt.analysis) average_path_length() (in module nngt.analysis) B bayesian_blocks() (in module nngt.analysis) betweenness() (in module nngt.analysis) betweenness_distrib() (in module nngt.analysis) betweenness_distribution() (in module nngt.plot) binning() (in module nngt.analysis) C centroid (nngt.geometry.Shape attribute) chord_diagram() (in module nngt.plot) circular() (in module nngt.generation) clear_all_edges() (nngt.Graph method) closeness() (in module nngt.analysis) compare_population_attributes() (in module nngt.plot) connect_groups() (in module nngt.generation) connect_neural_groups() (in module nngt.generation) connect_neural_types() (in module nngt.generation) connect_nodes() (in module nngt.generation) connected_components() (in module nngt.analysis) contains_neurons() (nngt.geometry.Shape method) copy() (nngt.geometry.Area method) (nngt.geometry.Shape method) (nngt.Graph method) (nngt.Group method) (nngt.NeuralGroup method) (nngt.NeuralPop method) (nngt.Structure method) correlation_to_attribute() (in module nngt.plot) create_group() (nngt.NeuralPop method) (nngt.Structure method) create_meta_group() (nngt.NeuralPop method) (nngt.Structure method) culture_from_file() (in module nngt.geometry) D default_areas (nngt.geometry.Shape property) degree_distrib() (in module nngt.analysis) degree_distribution() (in module nngt.plot) delete_edges() (nngt.Graph method) delete_nodes() (nngt.Graph method) delta_distrib() (in module nngt.lib) diameter() (in module nngt.analysis) disk() (nngt.geometry.Shape static method) distance_rule() (in module nngt.generation) draw_map() (in module nngt.geospatial) draw_network() (in module nngt.plot) E edge_attributes (nngt.Graph property) edge_attributes_distribution() (in module nngt.plot) edge_id() (nngt.Graph method) edge_nb() (nngt.Graph method) edges_array (nngt.Graph property) ellipse() (nngt.geometry.Shape static method) erdos_renyi() (in module nngt.generation) exc_and_inhib() (nngt.Network class method) (nngt.NeuralPop class method) excitatory (nngt.MetaNeuralGroup property) (nngt.NeuralPop property) F find_idx_nearest() (in module nngt.lib) fixed_degree() (in module nngt.generation) from_degree_list() (in module nngt.generation) from_file() (nngt.geometry.Shape static method) (nngt.Graph static method) from_gids() (nngt.Network class method) from_groups() (nngt.NeuralPop class method) (nngt.Structure class method) from_library() (nngt.Graph class method) from_matrix() (nngt.Graph class method) from_network() (nngt.NeuralPop class method) from_polygon() (nngt.geometry.Shape static method) from_shape() (nngt.geometry.Area class method) from_wkt() (nngt.geometry.Shape static method) G gaussian_degree() (in module nngt.generation) gaussian_distrib() (in module nngt.lib) generate() (in module nngt), [1] get_attribute_type() (nngt.Graph method) get_b2() (in module nngt.analysis) get_betweenness() (nngt.Graph method) get_config() (in module nngt), [1] get_degrees() (nngt.Graph method) get_delays() (nngt.Graph method) get_density() (nngt.Graph method) get_edge_attributes() (nngt.Graph method) get_edge_types() (nngt.Graph method) (nngt.Network method) get_edges() (nngt.Graph method) get_firing_rate() (in module nngt.analysis) get_group() (nngt.Structure method) get_nest_adjacency() (in module nngt.simulation) get_neuron_type() (nngt.Network method) get_node_attributes() (nngt.Graph method) get_nodes() (nngt.Graph method) get_param() (nngt.NeuralPop method) get_positions() (nngt.SpatialGraph method) get_properties() (nngt.Structure method) get_recording() (in module nngt.simulation) get_results() (in module nngt.database) get_spikes() (in module nngt.analysis) get_structure_graph() (nngt.Graph method) get_weights() (nngt.Graph method) global_clustering() (in module nngt.analysis) global_clustering_binary_undirected() (in module nngt.analysis) Graph (class in nngt), [1] graph (nngt.Graph property) graph_id (nngt.Graph property) Group (class in nngt), [1] GroupProperty (class in nngt) H has_edge() (nngt.Graph method) has_model (nngt.NeuralGroup property) has_models (nngt.NeuralPop property) hive_plot() (in module nngt.plot) I id_from_nest_gid() (nngt.Network method) ids (nngt.Group property) (nngt.NeuralGroup property) (nngt.Structure property) inhibitory (nngt.MetaNeuralGroup property) (nngt.NeuralPop property) InvalidArgument (class in nngt.lib) is_clear() (in module nngt.database) is_connected() (nngt.Graph method) is_directed() (nngt.Graph method) is_integer() (in module nngt.lib) is_iterable() (in module nngt.lib) is_metagroup (nngt.Group property) is_network() (nngt.Graph method) is_spatial() (nngt.Graph method) is_valid (nngt.Group property) (nngt.Structure property) is_weighted() (nngt.Graph method) L lattice_rewire() (in module nngt.generation) library_draw() (in module nngt.plot) lin_correlated_distrib() (in module nngt.lib) load_from_file() (in module nngt), [1] local_closure() (in module nngt.analysis) local_clustering() (in module nngt.analysis) local_clustering_binary_undirected() (in module nngt.analysis) log_correlated_distrib() (in module nngt.lib) log_simulation_end() (in module nngt.database) log_simulation_start() (in module nngt.database) lognormal_distrib() (in module nngt.lib) M make_nest_network() (in module nngt.simulation) make_network() (nngt.Graph static method) make_spatial() (nngt.Graph static method) MetaGroup (class in nngt), [1] MetaNeuralGroup (class in nngt), [1] module nngt nngt.analysis nngt.database.db_generation nngt.generation nngt.geometry nngt.geospatial nngt.lib nngt.plot, [1] nngt.simulation, [1] monitor_groups() (in module nngt.simulation) monitor_nodes() (in module nngt.simulation) N name (nngt.Graph property) (nngt.Group property) neighbours() (nngt.Graph method) nest_gids (nngt.NeuralGroup property) (nngt.NeuralPop property) NestMod (class in nngt.simulation) Network (class in nngt), [1] NeuralGroup (class in nngt), [1] NeuralPop (class in nngt), [1] neuron_model (nngt.NeuralGroup property) neuron_param (nngt.NeuralGroup property) neuron_properties() (nngt.Network method) neuron_type (nngt.NeuralGroup property) new_edge() (nngt.Graph method) new_edge_attribute() (nngt.Graph method) new_edges() (nngt.Graph method) new_node() (nngt.Graph method) new_node_attribute() (nngt.Graph method) newman_watts() (in module nngt.generation) nngt module nngt.analysis module nngt.database.db_generation module nngt.generation module nngt.geometry module nngt.geospatial module nngt.lib module nngt.plot module, [1] nngt.simulation module, [1] node_attributes (nngt.Graph property) node_attributes() (in module nngt.analysis) node_attributes_distribution() (in module nngt.plot) node_nb() (nngt.Graph method) non_default_areas (nngt.geometry.Shape property) nonstring_container() (in module nngt.lib) num_graphs() (nngt.Graph class method) num_iedges() (in module nngt.analysis) num_mpi_processes() (in module nngt), [1] num_networks() (nngt.Network class method) O on_master_process() (in module nngt), [1] P palette_continuous() (in module nngt.plot) palette_discrete() (in module nngt.plot) parent (nngt.geometry.Shape property) (nngt.Group property) (nngt.Structure property) plot_activity() (in module nngt.simulation) plot_shape() (in module nngt.geometry) pop_largest() (in module nngt.geometry) population (nngt.Network property) price_scale_free() (in module nngt.generation) properties (nngt.Group property) (nngt.MetaNeuralGroup property) (nngt.NeuralGroup property) R random_obstacles() (nngt.geometry.Shape method) random_rewire() (in module nngt.generation) random_scale_free() (in module nngt.generation) randomize_neural_states() (in module nngt.simulation) raster_plot() (in module nngt.simulation) reciprocity() (in module nngt.analysis) rectangle() (nngt.geometry.Shape static method) reproducible_weights() (in module nngt.simulation) reset() (in module nngt.database) reset_config() (in module nngt), [1] return_quantity (nngt.geometry.Shape property) S save_config() (in module nngt), [1] save_spikes() (in module nngt.simulation) save_to_file() (in module nngt), [1] seed() (in module nngt), [1] seed_neurons() (nngt.geometry.Shape method) set_config() (in module nngt), [1] set_delays() (nngt.Graph method) set_edge_attribute() (nngt.Graph method) set_minis() (in module nngt.simulation) set_model() (nngt.NeuralPop method) set_name() (nngt.Graph method) set_neuron_param() (nngt.NeuralPop method) set_node_attribute() (nngt.Graph method) set_noise() (in module nngt.simulation) set_parent() (nngt.geometry.Shape method) set_poisson_input() (in module nngt.simulation) set_positions() (nngt.SpatialGraph method) set_properties() (nngt.Structure method) set_return_units() (nngt.geometry.Shape method) set_step_currents() (in module nngt.simulation) set_types() (nngt.Graph method) (nngt.Network method) (nngt.SpatialNetwork method) set_weights() (nngt.Graph method) Shape (class in nngt.geometry) shape (nngt.SpatialGraph property) shapes_from_file() (in module nngt.geometry) shortest_distance() (in module nngt.analysis) shortest_path() (in module nngt.analysis) size (nngt.Group property) (nngt.Structure property) small_world_propensity() (in module nngt.analysis) sparse_clustered() (in module nngt.generation) SpatialGraph (class in nngt), [1] SpatialNetwork (class in nngt), [1] spectral_radius() (in module nngt.analysis) Structure (class in nngt), [1] structure (nngt.Graph property) subgraph_centrality() (in module nngt.analysis) syn_spec (nngt.NeuralPop property) T to_file() (nngt.Graph method) to_nest() (nngt.Network method) to_undirected() (nngt.Graph method) total_firing_rate() (in module nngt.analysis) transitivity() (in module nngt.analysis) triangle_count() (in module nngt.analysis) triplet_count() (in module nngt.analysis) type (nngt.Graph property) U uniform() (nngt.Network class method) (nngt.NeuralPop class method) uniform_distrib() (in module nngt.lib) unit (nngt.geometry.Shape property) use_backend() (in module nngt), [1] W watts_strogatz() (in module nngt.generation)